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Leao, Tiago F.; Clark, Chase M.; Bauermeister, Anelize; Elijah, Emmanuel O.; Gentry, Emily C.; Husband, Makhai; Oliveira, Michelli F.; Bandeira, Nuno; Wang, Mingxun; Dorrestein, Pieter C. (, Nature Metabolism)
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microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics dataZuffa, Simone; Schmid, Robin; Bauermeister, Anelize; P. Gomes, Paulo Wender; Caraballo-Rodriguez, Andres M.; El Abiead, Yasin; Aron, Allegra T.; Gentry, Emily C.; Zemlin, Jasmine; Meehan, Michael J.; et al (, Nature Microbiology)Abstract microbeMASST, a taxonomically informed mass spectrometry (MS) search tool, tackles limited microbial metabolite annotation in untargeted metabolomics experiments. Leveraging a curated database of >60,000 microbial monocultures, users can search known and unknown MS/MS spectra and link them to their respective microbial producers via MS/MS fragmentation patterns. Identification of microbe-derived metabolites and relative producers without a priori knowledge will vastly enhance the understanding of microorganisms’ role in ecology and human health.more » « less
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Jarmusch, Alan K.; Wang, Mingxun; Aceves, Christine M.; Advani, Rohit S.; Aguirre, Shaden; Aksenov, Alexander A.; Aleti, Gajender; Aron, Allegra T.; Bauermeister, Anelize; Bolleddu, Sanjana; et al (, Nature Methods)
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Schorn, Michelle A.; Verhoeven, Stefan; Ridder, Lars; Huber, Florian; Acharya, Deepa D.; Aksenov, Alexander A.; Aleti, Gajender; Moghaddam, Jamshid Amiri; Aron, Allegra T.; Aziz, Saefuddin; et al (, Nature Chemical Biology)null (Ed.)
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